I have used snpEff to annotate my vcf file. I previously use Annovar to annotate my vcf file and the fields are nicely separated in tabular forms, hence making it easy to extract information for further analysis.
snpEff annotation is written in 'info' column in one line separated by a pipe ' | ' , making it difficult to extract certain information . Is there a tool to separate each annotation into separate tab ? I tried to write a python script (with a very limited knowledge about programming ) but it gets messy .