Convert excel file with ensemble transcript IDs to Gene IDs

Question

[amyfm]

Hi,

After differential expression analysis, I have a list of around 30.000 ensembl ID transcripts in an Excel file, and I would like to have the same list in the same order but with Gene IDs.

I have been trying with David Ontology but I can't get to obtain it.

Do you know any practical way?

Thank you

Answer 1

[cycro27]

DAVID is a good way to go:

Go here: https://david.ncifcrf.gov/conversion.jsp

You can upload your list on the left:

1) Select ENSEMBL_GENE_ID "under Option 1"
2) Click "Submit to conversion tool"
3) On the following page click "Download file" in the top right corner