Question: Using TargetScan on other species
gravatar for biofalconch
4.3 years ago by
biofalconch430 wrote:

Can TargetScan be used without having to find all the genes it uses to construct their UTR database on other species? As you may know, TargetScan uses a multiple alignment of the 3' UTRs of the same gene in different species, and it is essential to the feature know as "Probability of conserved targeting".

Will it affect too much the output if I don't use the 3'UTRs of other species?

targetscan • 1.5k views
ADD COMMENTlink modified 4.2 years ago by josejose10 • written 4.3 years ago by biofalconch430
gravatar for josejose
4.2 years ago by
josejose10 wrote:


In the discussion of the new version of targetscan, it is mentioned that some features of the context++ model allow to find nonconserved targets

ADD COMMENTlink modified 10 weeks ago by RamRS25k • written 4.2 years ago by josejose10
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