CGhub Whole Genome Sequencing Data sequencing info
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Entering edit mode
8.3 years ago
morovatunc ▴ 550

Hello,

I need to get sequencing information of couple CGhub data. I don't know what that data specified therefore, my title might have been wrong. I apologise for that.

The info that need are:

  • Reads, read length, paired, total bases, expected coverage (x), mapped reads, effective coverage

I couldn't find this in cg hub analysis full metadata file. So, should I look for this info at each bam file flag stat? or it has to be reported and I don't need to download it?

Thank you for your help

WGS cghub TGCA • 1.6k views
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