i'm new and interested to test music v0.4 . now i have problems to get the same result like in the paper (http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3409272/)
i downloaded, the same files like it's noticed in the paper:
<"Sample data set used in this study
<Alignment mapping files for the ovarian cancer cohort, as well as all mutational data in mutation annotation format <(MAF) are available at The Cancer Genome Atlas (TCGA) website, http://cancergenome.nih.gov/, via dbGaP. The <dbGaP study accession number is phs000178.v1.p1. "
But anyway. no chance to get the same results. i have the oppertunities or access to get all data, i hopefully think ;) , but it doesn't work.
Could anyone help me with the original files or links directly to the original files from that paper?
with best regards