Generating GTF file for de novo assmebled transcriptome

Question

[EVR]

Hi,

I have de novo assembled transcriptome of a non-model organism. Is it possible to generate a gtf file for this transcriptome which contains both information of both coding and non coding genes,

Thanks in advance

Answer 1

[Benn]

Maybe this post will help you:

Annotating sequences after de-novo Trinity assembly and RSEM analysis...there must be an easier way!