Download multiple RNAseq experiments
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8.5 years ago
xcalle91 ▴ 20

Hi!

I would like to download many human RNAseq raw data (up to 200, as many as I can).

So far I have used fastaq-dump + <RNAseq ID>

but for doing this I have to find each one in pubmed (http://www.ncbi.nlm.nih.gov/sra/?term=). which is quite slow...

Is it any place or anyway I can get the list of IDs?

Thanks in advance.

RNA-Seq • 1.5k views
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hi, You might want to look here. - How To Download All Sra Samples At Once ?

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