Question: Bambus2 .Mate File
gravatar for Rahul Sharma
8.5 years ago by
Rahul Sharma600
Rahul Sharma600 wrote:

Dear all, I have merged two velvet assemblies using minimus2 and now I have .contig and .bnk/ files, I want to do scaffolding of these generated contigs using goBambus2. As goBambus2 requires .mate file, How can I generate this file? I did my assemblies from Illumina paired-end reads. Is this .mate file refer to that pair information? I read many forums but did not get any solution. Can anybody please suggest me how can I proceed further? Best regards, Rahul

scaffolding • 2.1k views
ADD COMMENTlink modified 4.5 years ago by Biostar ♦♦ 20 • written 8.5 years ago by Rahul Sharma600
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1484 users visited in the last hour