I am completely new to bioinformatics and I'm working on a project about tomato. So I have used some package to identify the orthologs of S.pennellii to transcription factors of S.lycopersicum. I did that by aligning the S.lycopersicum's transcription factor protein sequences against all the protein sequences (fasta file on ncbi) of S.pennellii.
Now I basically have something like this
What I want to do about these protein ids is that I want to relate them to genbank file (nucleotide sequences), does anyone have any idea how can I do this? These protein id may not be compatible with the genbank files as they having different naming system? Thank you very much