First of all, I want to clarify that I dont think TCGA can do RNA seq only for tumor sample? This is nonsense. This information must be somewhere. So, Can I reach this information with TCGA-Assembler.
- referring to this post
TCGA: Does TCGA cancer studies have mRNA expression data for Control/Normal samples? I tried to use TCGA-Assembler however it does not give this information neither. Is TCGA-assembler let you download data that cannot be seen by the Data matrix? or It just eases the download procedure ? Because that I understood from the answers was not all the information was visible in data matrix so this R package allows to download all of them ?!?
- When I checked the entries one by one, even though some of the entries have tumor and normal pairs, big majority of them are either only tumor or normal. I think this is wrong?
Any information is useful.
Thank you for your help,