Question: kobasdb - problems
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gravatar for maxnest
3.1 years ago by
maxnest10
maxnest10 wrote:

Hello, collegues! I have some problems with program "kobas 2.0". Even if i try start test-example , on screen i have only this error message :

maxnest@maxnest:~/Desktop/kobas2.0-20150126/test$ '/home/maxnest/Desktop/kobas2.0-20150126/scripts/annotate.py' -i '/home/maxnest/Desktop/kobas2.0-20150126/test/example.fasta' Traceback (most recent call last): File "/home/maxnest/Desktop/kobas2.0-20150126/scripts/annotate.py", line 3, in <module> from kobas.scripts import annotate File "/home/maxnest/Desktop/kobas2.0-20150126/src/kobas/scripts/annotate.py", line 59, in <module> organismdb = dbutils.KOBASDB(kobasrc['kobasdb'] + 'organism.db') KeyError: 'kobasdb'

Could somebody help me? if i understand it right , problem with paths to db-folder...

My apologies for my english

kobas path db • 1.1k views
ADD COMMENTlink written 3.1 years ago by maxnest10
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