Question: List of all known enhancers in human genome
2
gravatar for jennifer rondineau
18 months ago by
Nantes, France
jennifer rondineau20 wrote:

Hi,

Is there a way to get a list of the start and end base pair positions of all known enhancers in the human genome (hg19) ?

Thanks in advance!

hg19 enhancers • 1.1k views
ADD COMMENTlink modified 9 weeks ago by Biostar ♦♦ 20 • written 18 months ago by jennifer rondineau20
3
gravatar for genomax
18 months ago by
genomax33k
United States
genomax33k wrote:

There may be other answers but one option would be table browser from UCSC (http://genome.ucsc.edu --> Tools menu --> Table Browser).
You would want to select group: regulation table:vista enhancers and then export the data in BED format.
Data comes from: http://enhancer.lbl.gov/

ADD COMMENTlink modified 18 months ago • written 18 months ago by genomax33k

Thanks for your help

ADD REPLYlink written 18 months ago by jennifer rondineau20
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