Question: Risk allele frequency via 1000 genome browser
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gravatar for 12021560-040
3.6 years ago by
12021560-04060
Pakistan
12021560-04060 wrote:

How to use allele frequency calculator of 1000 genome browser with external files? How can I prepare the vcf file of the snps to be used in allele frequency calculator?

ADD COMMENTlink written 3.6 years ago by 12021560-04060

what exactly do you need? once in vcf format, do you know you can compute allele frequency through vcftools' fill-an-ac?

ADD REPLYlink written 3.5 years ago by Jorge Amigo11k
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