I have used Pipeline Pilot in the past for cheminformatics work, and I found it to be a great system for data analysis and reporting.
In my current job I've been using Galaxy extensively, and I have a pretty good idea of its strengths and peccadilloes. It's a lot like Pipeline Pilot, which leads to my question: has anyone here used both Pipeline Pilot and Galaxy for NextGen data analysis? I've read through the marketing material from Accelrys, but I haven't talked to anyone yet who has used Pipeline Pilot's nextgen package for their data crunching.
Specifically, I'd like to know if there is anything in the NextGen world that Pipeline Pilot can do that would make it a worthwhile paid alternative to Galaxy, which is free.