How to export annotated sequences with gene symbols to a fasta file using blast2go?

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8.0 years ago

grayapply2009 ▴ 280

Hi guys, I recently finished annotating my sequences with B2G. Now I'm trying to export all my sequences with gene names and gene symbols to a fasta file. I found B2G assigned a gene name to each of my sequences. Names assigned by B2G look like these: falcon anemia group d2 partial, phosphoinositide 3-kinase regulatory subunit 4, beta-adducing isoform x1 and so on. My questions are:

Does B2G assign gene names and GO terms using the same Annotation Rule mentioned in the instruction book?
Is there a way in B2G to assign gene symbols instead of full names to my sequences?

blast blast2go GO ID • 2.5k views

ADD COMMENT • link updated 7.9 years ago by Biostar 20 • written 8.0 years ago by grayapply2009 ▴ 280

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Hi guys, I modified my questions. Please take a look again. Does anyone have any experience with B2G? Please help me.

ADD REPLY • link 8.0 years ago by grayapply2009 ▴ 280

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