Question: Extract The Abstract Of Interpro Entries
1
gravatar for Dejian
7.2 years ago by
Dejian1.3k
United States
Dejian1.3k wrote:

I have a list of Interpro IDs and want to extract the Abstract of InterPro Annotation section. Is there a way to do this quickly? Thanks!

• 1.3k views
ADD COMMENTlink written 7.2 years ago by Dejian1.3k
4
gravatar for Michael Kuhn
7.2 years ago by
Michael Kuhn5.0k
EMBL Heidelberg
Michael Kuhn5.0k wrote:

For these kinds of queries, BioMart is often the way to go. There you can select the fields you want to have and filter for InterPro ids. (E.g. you can upload a list of ids.) If you need to retrieve abstracts repeatedly, you can even get Perl code or an URL you can adapt.

ADD COMMENTlink written 7.2 years ago by Michael Kuhn5.0k

Thank you, Michael. Your answer is pretty helpful. It also helps me extract other info I need.

ADD REPLYlink written 7.2 years ago by Dejian1.3k
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