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8.1 years ago
jcolella.jc
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When I run the Admixture program against genomic SNP data from multiple samples some of the output cv values = "nan" or "-nan".
The manual does not explain this output - does anyone know whether this is a high or low cv value? Otherwise I cannot determine the best K value for my samples.
Anything helps!
My guess would be that this looks like a divide by zero error -> infinity.