Question: How to get a fastA file with amino acid sequences from a list of accession numbers
1
gravatar for n00bgenome
3.4 years ago by
n00bgenome20
n00bgenome20 wrote:

So I have this list of 3000 protein sequences:

http://www.genome.jp/dbget-bin/get_linkdb?-t+9+ko:K03086

What I want is all of their amino acid sequences together in 1 file. How would I do this?

sequence • 1.6k views
ADD COMMENTlink modified 3.4 years ago by natasha.sernova3.6k • written 3.4 years ago by n00bgenome20
2
gravatar for natasha.sernova
3.4 years ago by
natasha.sernova3.6k
natasha.sernova3.6k wrote:

See the post

How To Programmatically Retrieve A Batch Of Fasta Sequences From For A List Of Uniprot Accession Ids?

There are Perl-versions and UniProt-batch version inside.

ADD COMMENTlink modified 3.4 years ago • written 3.4 years ago by natasha.sernova3.6k
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