How to build GO dengrogram using already enriched GO term?

Question

[mqding]

I have a question. I have a GO enrichment data for example, several significant GO terms, How can I build GO dendrogram using these significant GO terms with p-value? Please recommand some software.Thanks a lot!

Answer 1

[Benn]

Do you mean an Acyclic graph? You can make them with topGO in R.

http://bioconductor.org/packages/release/bioc/html/topGO.html

Answer 2

[WouterDeCoster]

Have a look at clusterProfiler from Bioconductor, I think you mean something like this: http://bioconductor.org/packages/release/bioc/vignettes/clusterProfiler/inst/doc/clusterProfiler.html#plotgograph

Answer 3

[mqding]

Thanks for the answers. But I am analyzing the data not from the model plants. Is it ok to use the above two software?