Eqtl Data In Dogs?
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9.1 years ago
Ahdf-Lell-Kocks ★ 1.6k

Is there any publicly available eQTL data in dogs or some other laurasiatheria genome? If possible something in a format that can be uploaded or displayed somehow in one of the common genome browsers, like UCSC or Ensembl.

eqtl genome • 1.9k views
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Interesting question. I wonder if the very long-range haplotypes in dogs (due to excessive inbreeding in purebreds) would complicate identification of eQTL.

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Long haplotypes should make trait association pop out even more, given the same sample size.

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I know that but was wondering if the eQTL SNP may "appear" to be acting at a greater distance in dog compared to human because of these long-range haplotypes.

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