Question: Eqtl Data In Dogs?
4
gravatar for Ahdf-Lell-Kocks
7.7 years ago by
Ahdf-Lell-Kocks1.6k
Ahdf-Lell-Kocks1.6k wrote:

Is there any publicly available eQTL data in dogs or some other laurasiatheria genome? If possible something in a format that can be uploaded or displayed somehow in one of the common genome browsers, like UCSC or Ensembl.

genome eqtl • 1.7k views
ADD COMMENTlink written 7.7 years ago by Ahdf-Lell-Kocks1.6k
1

Interesting question. I wonder if the very long-range haplotypes in dogs (due to excessive inbreeding in purebreds) would complicate identification of eQTL.

ADD REPLYlink written 7.7 years ago by Larry_Parnell16k

Long haplotypes should make trait association pop out even more, given the same sample size.

ADD REPLYlink written 7.7 years ago by 2184687-1231-83-5.0k

I know that but was wondering if the eQTL SNP may "appear" to be acting at a greater distance in dog compared to human because of these long-range haplotypes.

ADD REPLYlink written 7.7 years ago by Larry_Parnell16k
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1766 users visited in the last hour