Question: Problem In running Modeller for Homology Modelling of Protein
0
gravatar for Vinay Singh
3.8 years ago by
Vinay Singh40
INDIA, New Delhi, JNU
Vinay Singh40 wrote:

Hello Everyone,

I am Running Modeller for Homology Modelling of Protein but Getting error and not able to resolve the problem please help to sort out this error.

1. mod9.16 model_default.py                   
Could not find platform independent libraries <prefix>
Could not find platform dependent libraries <exec_prefix>
Consider setting $PYTHONHOME to <prefix>[:<exec_prefix>]
'import site' failed; use -v for traceback
FATAL ERROR: Cannot open file model_default.py: No such file or directory

But the model_default.py file is their in my system.

ADD COMMENTlink modified 3.5 years ago by Biostar ♦♦ 20 • written 3.8 years ago by Vinay Singh40

Have you tried to run your original command with -v option as the error suggests? Before you tackle the model_default.py problem there are (potentially) missing libraries to take care of first (which may be fixed by setting $PYTHON_HOME).

ADD REPLYlink modified 3.8 years ago • written 3.8 years ago by genomax78k

Is the model_default.py script in the same folder from which you invoke mod9.16? How did you install modeller?

ADD REPLYlink written 3.7 years ago by Felix_Sim250
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 890 users visited in the last hour