Question: Problem In running Modeller for Homology Modelling of Protein
gravatar for Vinay Singh
3.8 years ago by
Vinay Singh40
INDIA, New Delhi, JNU
Vinay Singh40 wrote:

Hello Everyone,

I am Running Modeller for Homology Modelling of Protein but Getting error and not able to resolve the problem please help to sort out this error.

1. mod9.16                   
Could not find platform independent libraries <prefix>
Could not find platform dependent libraries <exec_prefix>
Consider setting $PYTHONHOME to <prefix>[:<exec_prefix>]
'import site' failed; use -v for traceback
FATAL ERROR: Cannot open file No such file or directory

But the file is their in my system.

ADD COMMENTlink modified 3.5 years ago by Biostar ♦♦ 20 • written 3.8 years ago by Vinay Singh40

Have you tried to run your original command with -v option as the error suggests? Before you tackle the problem there are (potentially) missing libraries to take care of first (which may be fixed by setting $PYTHON_HOME).

ADD REPLYlink modified 3.8 years ago • written 3.8 years ago by genomax78k

Is the script in the same folder from which you invoke mod9.16? How did you install modeller?

ADD REPLYlink written 3.7 years ago by Felix_Sim250
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