Question: Genetic map for outbred F1 population- mapping software?
gravatar for Pragy30
4.4 years ago by
Pragy3010 wrote:

Hi, I have SNP data from the family of ~192 siblings and 2 heterozygous parents (snails). I want to create a genetic map using this data, however I am not aware of which software would be useful for me. I came across r/qtl which seemed to be quite easy to use. But I have been discouraged as it is especially meant to deal with inbred populations. Can you please suggest if R/QTL can be used in this case? If not then which mapping software can I use? I am quite new to this hence all suggestions and comments are welcome.

ADD COMMENTlink modified 4.4 years ago by Selenocysteine600 • written 4.4 years ago by Pragy3010
gravatar for Selenocysteine
4.4 years ago by
Dublin, Ireland
Selenocysteine600 wrote:

Hi, I used to use (!) GridQTL :)

ADD COMMENTlink written 4.4 years ago by Selenocysteine600
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