Question: Genetic map for outbred F1 population- mapping software?
1
gravatar for Pragy30
4.4 years ago by
Pragy3010
Pragy3010 wrote:

Hi, I have SNP data from the family of ~192 siblings and 2 heterozygous parents (snails). I want to create a genetic map using this data, however I am not aware of which software would be useful for me. I came across r/qtl which seemed to be quite easy to use. But I have been discouraged as it is especially meant to deal with inbred populations. Can you please suggest if R/QTL can be used in this case? If not then which mapping software can I use? I am quite new to this hence all suggestions and comments are welcome.

ADD COMMENTlink modified 4.4 years ago by Selenocysteine600 • written 4.4 years ago by Pragy3010
1
gravatar for Selenocysteine
4.4 years ago by
Dublin, Ireland
Selenocysteine600 wrote:

Hi, I used to use (!) GridQTL :) http://www.gridqtl.org.uk/

ADD COMMENTlink written 4.4 years ago by Selenocysteine600
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 2261 users visited in the last hour