Estimating tumor purity from genomic data
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5.5 years ago
Pappu ★ 2.0k

I am trying to estimate tumor purity from genomic data. I am wondering which method is good since there are several methods out there.

tumor purity • 3.1k views
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what "genomics data" do you have ?

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I got mutation and copy number data.

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I'd imagine this is an incredibly difficult job unless you have single-cell data. Going for a slightly different protocol would be infinitely better than spending an extra year on the data analysis.

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5.1 years ago
Ron ★ 1.1k

CLONET : to infer tumor DNA purity and tumor ploidy

http://demichelislab.unitn.it/doku.php?id=public:clonet

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