Question: RnBeads- GenomicFeatures is not available for R3.2.3
0
gravatar for mackin-sj1
24 months ago by
mackin-sj10
mackin-sj10 wrote:

Hi All,

I have updated R to version to 3.2.3 recently and struggling to get all the packages with RnBeads to load correctly, is anyone else suffering with this? Genomic Features in particular fails to work and this is stopping RnBeads from running on my idats.

Any help is greatly appreciated!

Many thanks!

r3.2.3 rnbeads methylation R 450k • 550 views
ADD COMMENTlink modified 24 months ago by Charles Warden5.0k • written 24 months ago by mackin-sj10
0
gravatar for andrew.j.skelton73
24 months ago by
London
andrew.j.skelton734.8k wrote:

Go to session -> restart session and then try to load the package. Often when installing new packages in a current session it's easy for things to get mixed up with packages that are already loaded.

ADD COMMENTlink written 24 months ago by andrew.j.skelton734.8k
0
gravatar for Charles Warden
24 months ago by
Charles Warden5.0k
Duarte, CA
Charles Warden5.0k wrote:

Which version of RnBeads are you using?

I've never had trouble using RnBeads when I install using the source() command:

http://rnbeads.mpi-inf.mpg.de/installation.php

At one point, my version of R (on a Mac) was similar to version 3.2.3. Not sure if the Bioconductor version is 100% identical.

ADD COMMENTlink written 24 months ago by Charles Warden5.0k
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