Need Two well known yeast microarray dataset for the purpose of clustering.

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7.9 years ago

animesh_10kuet ▴ 10

I am now working on clustering the gene expression data. I need two well known yeast (S. cerevisiae) datasets which are used in two papers. I am unable to find this datasets.

The papers are:

Cluster analysis and display of genome-wide expression patterns, MICHAEL B. EISEN, PAUL T. SPELLMAN, PATRICK O. BROWN†, AND DAVID BOTSTEIN
Exploring the conditional coregulation of yeast gene expression through fuzzy k-means clustering., Gasch AP1, Eisen MB.

Please help to get these two datasets.

gene genome • 1.5k views

ADD COMMENT • link updated 6.0 years ago by Biostar 20 • written 7.9 years ago by animesh_10kuet ▴ 10

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Have you checked public repositories ? Are there accession numbers in the papers ? The second paper seems to have combined datasets from previous papers so you may have to track down each paper.

ADD REPLY • link 7.9 years ago by Jean-Karim Heriche 27k

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These papers may predate GEO and as such the data may not be available in GEO. @animesh if you must have the datasets from these papers then you could email Michael Eisen @ UC, Berkeley.

ADD REPLY • link 7.9 years ago by GenoMax 142k

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I checked all public repositories as far as I can. There are no accession numbers in the papers.

ADD REPLY • link 7.9 years ago by animesh_10kuet ▴ 10

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