Can anybody help me to find out the list of seed sequences of human miRNA. Is there any tool, database or article where i can get all the seed list.
Hey genomax2 many many thanks for your answer
Can you plz send a screenshot for TargetScan entries
Select a species : Human
Select a broadly conserved* microRNA family ???
Select a conserved* microRNA family ???
Select a poorly conserved but confidently annotated microRNA family ???
Select another miRBase annotation ???
Note that most of these families are star miRNAs or RNA fragments misannotated as miRNAs.
Enter a microRNA name (e.g. "miR-9-5p") ????
It would be really grateful.. if you can reply me back
You need to do some work yourself. We are not going to do your homework.
BTW: Don't post the same question using different accounts. Your accounts may be suspended/moderated.
This file from the TargetScan website appears to have miRNA seed sequences for many species.
Thanks a lot for your answer.