Question: picard.jar SamToFastq "paired reads have different names"
3.6 years ago by
sami.hailu.15 • 0
sami.hailu.15 • 0 wrote:
I'm trying to convert a bam file into paired fastq files using picard:
picard.jar SamToFastq input.bam F=one.fq F2=two.fq NON_PF=true
But the oputput files one.fq and two.fq seem to have different names for paired reads. Can someone suggest me other ways of generating paired reads with same name?
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