Question: Platanus running problem
0
gravatar for bampress
3.2 years ago by
bampress0
China
bampress0 wrote:

Hi, everyone,

I'm using Platanus to assemble a plant genome with a little high heterozygosity(about 0.8%). The software always give me the error report : K = 16, saving kmers from reads... Error(5): Kmer distribution exception!! Kmer distribution cannot be caluculated proper.

I have tried all the things I can do, but it still doesn't work. How can I solve this problem? Are there good examples or methods for heterozygous genome assembling?

genome assembly software error • 1.3k views
ADD COMMENTlink written 3.2 years ago by bampress0

Inconclusive prior thread with an identical error: Platanus error during assembly

You may want to contact the authors about this error since they may be able to help quickly.

ADD REPLYlink written 3.2 years ago by genomax73k

Thx for your comment. I have contacted the author, but there is no reply.

ADD REPLYlink written 3.2 years ago by bampress0
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