Question: datasets for brain cancer survival prediction
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gravatar for meeravarma.cev
2.6 years ago by
meeravarma.cev20 wrote:

how to get a valid dataset for Glioblastoma survival prediction based on clinincal and genomic factors and treatment patterns from TCGA or any other biological data portals

ADD COMMENTlink modified 2.6 years ago • written 2.6 years ago by meeravarma.cev20

Thank you for the information. I need clinical data, genomic data(like mRNA expression z-scores ,copy number variations) and treatment pattern patient wise.

ADD REPLYlink written 2.6 years ago by meeravarma.cev20

Did you try to look at GEO Datasets? I know they have at least some of the criteria that you may be looking for. The downside is that they are often associated with papers - i.e. many have already been looked at and examined. Of course that's not a problem if you are going to do meta analysis.

ADD REPLYlink written 2.6 years ago by jiwpark00200

I was not aware of GEO datasets.Thank You for the information and I will surely look into it.

ADD REPLYlink written 2.6 years ago by meeravarma.cev20
0
gravatar for EagleEye
2.6 years ago by
EagleEye6.2k
Sweden
EagleEye6.2k wrote:

This will provide you with survival analysis for LncRNAs (includes TCGA Glioblastoma samples),

http://ibl.mdanderson.org/tanric/_design/basic/query.html

ADD COMMENTlink modified 2.6 years ago • written 2.6 years ago by EagleEye6.2k
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