HTSeq installation documentation
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7.7 years ago
datakid • 0

Today one of my researchers came to me with the htseq-pysam error (seen also here and here).

Might I suggest that the installation instructions at least be updated to indicate pysam is a requirement?
software error • 1.0k views
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Sounds like a nice suggestion, you might make them to someone who can follow them.

BTW, featureCounts is way faster.

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featureCounts is way faster, and if you need union/intersection on top of featureCounts, try VERSE at http://kim.bio.upenn.edu/software/verse.shtml.

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