Hi Everyone,
I have two VCF files: 1) VCF file containing SNPs from my population 2) Another VCF file with 1000 Genome SNPs data set from 26 populations.
I want to extract those variants that are found to be rare (<0.5%) within global samples (1000G) but common within my population (>5%). Can anyone please suggest a way how to do that?
Thank you!