Question: How to get GFF file in genome guided assembly using StringTie
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gravatar for Bioinfonext
3.5 years ago by
Bioinfonext250
Korea
Bioinfonext250 wrote:

For genome guide assembly, I used the below command:

/home/yog/software/stringtie-1.3.2.Linux_x86_64/stringtie -p 8 -G gene.gtf -o genome.gtf -m 500 -v mapped.sorted.bam

genome gtf file generated, please suggest how I can get gff file also.

Thanks

rna-seq • 1.1k views
ADD COMMENTlink written 3.5 years ago by Bioinfonext250
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