Assembling sequence data generated by RADseq

Question

[shynilasanthi]

Hi I'm working on a project where I have to assemble sequences generated by RADseq.When I was looking for a tool or pipeline I got to know about Stacks pipeline.I would like to know if there are any other tools or pipelines that I can use for assembling my data

Answer 1

[Rohit]

Rainbow might be a good try

[shynilasanthi]

Thank you Rohit. I'll check that out

Answer 2

[h.mon]

There is a good number of tools available: pyRAD, dDocent, AftrRAD, just to name a few.