Finding Low Quality SNPs
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6.9 years ago
mms140130 ▴ 60

Hello,

I have a raw snps genotype data (rows are 700,000 Snps * columns are 1095 patient)

then I have divided the patients by race , so I have 3 data sets based on the race( white, black, and asian)

I would like to find the low quality SNPs using R within each group, can anyone suggest an R package that does that

SNP snp R • 942 views
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