Question: tajima D, nucleotide diversity and haplotype diversity
1
gravatar for wanjahi.njau
2.4 years ago by
wanjahi.njau10
wanjahi.njau10 wrote:

how do you compute tajima D, nucleotide diversity and haplotype diversity using VCF tools if you have data of 8 populations of 1 individual each

snp • 1.2k views
ADD COMMENTlink written 2.4 years ago by wanjahi.njau10

Unfortunately I think your sample size isn't big enough to make those analysis. One individual per population isn't enough to have meaningful information on your populations.

ADD REPLYlink written 2.4 years ago by guillaume.rbt620
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