Question: tajima D, nucleotide diversity and haplotype diversity
1
gravatar for wanjahi.njau
23 months ago by
wanjahi.njau10
wanjahi.njau10 wrote:

how do you compute tajima D, nucleotide diversity and haplotype diversity using VCF tools if you have data of 8 populations of 1 individual each

snp • 984 views
ADD COMMENTlink written 23 months ago by wanjahi.njau10

Unfortunately I think your sample size isn't big enough to make those analysis. One individual per population isn't enough to have meaningful information on your populations.

ADD REPLYlink written 23 months ago by guillaume.rbt530
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