Question: "Error in contrib.url(repos, type) : trying to use CRAN without setting a mirror" Error when installing package
0
gravatar for AB
7 months ago by
AB80
United States
AB80 wrote:

Hi.

I am trying to install a package a few packages from the source for R shiny-server,

sudo su - -c "R -e \"source('https://s3-us-west-2.amazonaws.com/10x.files/supp/cell-exp/rkit-install-1.1.0.R')\""

but the command is giving me an error

 Error in contrib.url(repos, type) : 
trying to use CRAN without setting a mirror
Calls: source ... eval -> eval -> install.packages -> grep -> contrib.url
Execution halted

How do i fix this ?

shiny-server R • 1.4k views
ADD COMMENTlink modified 7 months ago • written 7 months ago by AB80

This is the relevant issue.

trying to use CRAN without setting a mirror

http://stackoverflow.com/questions/11488174/how-to-select-a-cran-mirror-in-r

ADD REPLYlink modified 7 months ago • written 7 months ago by genomax37k
0
gravatar for AB
7 months ago by
AB80
United States
AB80 wrote:

Used this instead and it worked

sudo su - -c "R -e \"install.packages('http://s3-us-west-2.amazonaws.com/10x.files/code/cellrangerRkit-1.1.0.tar.gz', repos=NULL)\""
ADD COMMENTlink written 7 months ago by AB80
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1231 users visited in the last hour