Question: Icoshift is not working in Pathomx
0
gravatar for abje64
6 weeks ago by
abje640
abje640 wrote:

Hi, When I use Icoshift in Pathomx below error occur

Running tool Icoshift
Currently 1 jobs remaining
Starting job....

---------------------------------------------------------------------------TypeError                                 Traceback (most recent call last)<ipython-input-1-79e9e8268151> in <module>()
     63                                   coshift_preprocessing_max_shift=config['coshift_preprocessing_max_shift'],
     64                                   average2_multiplier=config['average2_multiplier'],
---> 65                                   fill_with_previous=config['fill_with_previous'],
     66                                                                )
     67 
TypeError: 'module' object is not callable

I also have problem with Metabohunter
Running tool MetaboHunter
Currently 1 jobs remaining
Starting job....

---------------------------------------------------------------------------ImportError                               Traceback (most recent call last)<ipython-input-1-92c1ee6302c9> in <module>()
      1 import pandas as pd
----> 2 import metabohunter as mh
      3 
      4 input_data = input_data.dropna(axis=1)Running tool None
Currently 1 jobs remaining
Starting job....

---------------------------------------------------------------------------ImportError                               Traceback (most recent call last)<ipython-input-1-92c1ee6302c9> in <module>()
      1 import pandas as pd
----> 2 import metabohunter as mh
      3 
      4 input_data = input_data.dropna(axis=1)
      5 
ImportError: No module named metabohunter

      5 
ImportError: No module named metabohunter
pathomx software error • 121 views
ADD COMMENTlink modified 6 weeks ago by WouterDeCoster19k • written 6 weeks ago by abje640

I added markup to your post for increased readability. You can do this by selecting the text and clicking the 101010 button. When you compose or edit a post that button is in your toolbar, see image below:

101010 Button

In addition, you should specify which operating system you used and how you installed the software

ADD REPLYlink modified 6 weeks ago • written 6 weeks ago by WouterDeCoster19k
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