Question: Mafft : FFT-INS-2 (Not tested.)
gravatar for icebreaked
3.5 years ago by
icebreaked0 wrote:

Hello guys.

I would like to insert sequences in an existing alignment with the software 'MAFFT'. But, after doing the "progressive alignment 1 & 2" and constructing a UPGMA tree, this software returns the following error :

disttbfast (nuc) Version 7.222 alg=M, model=DNA200 (2), 1.53 (4.59), -0.00 (-0.00), noshift, amax=0.0
0 thread(s)

 FFT-INS-2 (Not tested.)

If unsure which option to use, try 'mafft --auto input > output'.
For more information, see 'mafft --help', 'mafft --man' and the mafft page.

The default gap scoring scheme has been changed in version 7.110 (2013 Oct).
It tends to insert more gaps into gap-rich regions than previous versions.
To disable this change, add the --leavegappyregion option.

Do you have any idea what does this error mean ? I searched it but I didn't find anything.

Thank you in advance for your answers :)

Best regards

ADD COMMENTlink written 3.5 years ago by icebreaked0

Please update your post to include the commands used.

ADD REPLYlink written 3.5 years ago by h.mon31k
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1723 users visited in the last hour