I am trying to retrieve legacy data from GDC through TCGAbiolinks. Specifically, I'd like to retrieve all RNAseq data for "CCLE-BLCA', which you can access through this link.
I ran
query <- GDCquery(project = "CCLE-BLCA", legacy = TRUE)
and got the full table with all project ids, name, etc. But I always get the error
Error in checkProjectInput(project) : Please set a valid project argument from the column project_id above. Project CCLE-BLCA was not found.
Are you aware of a way to download this data?