Hello, I was wondering what was an ideal or the 'standard' pipeline for chipexo. Would something like raw seq results->fastq files->Bowtie for alignment -> GEM for peakcalling be good? Will this provide good 'enduser' data for the experimental scientist or is there another standard processing step? Would bowtie2 be better than bowtie?
Question: Good Pipeline for ChIPexo
3.0 years ago by
ad • 30
ad • 30 wrote:
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