Question: Fungal Metagenome Query
20 months ago by
subodh • 0
Bionivid Technology Pvt. Ltd, Bengaluru
subodh • 0 wrote:
I am using UNITE database for soil fungal metagenome analysis and I have few queries.
- What is the Species Hypotheses (SH) threshold (0.5 to 3.0%) used in UNITE and if we have to change the threshold how can we change it ?
- Is there any change in annotation if we change the threshold ?
- On what basis the default (1.5%) is defined ?
- What is the optimal threshold that can be used to analyse the fungal metagenome data ?
Thanks in advance.
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