Entering edit mode
6.8 years ago
tiffany.kosch
•
0
Hello All-
I would like to use PopGenome to analyze sequence diversity by individual and population. My sequences are currently in fasta format. I was wondering if there is a way to put individual and population identifiers on my sequences so that I can use PopGenome to get these summary statistics?
-Any advice would be greatly appreciated
What about
set.populations()
function?I have looked into using this function, but unfortunately I can't use it until I have individual assignments. At the moment I just have a list of sequences with multiple sequences per individual. E.g.
...and so on. Any idea how I can add identifiers to the fasta file that PopGenome (or another Pop Genetics R program) would recognize?