Question: How to find the different expression of lncRNA
0
gravatar for a511512345
2.8 years ago by
a511512345110
China guangxi nanning
a511512345110 wrote:

How to find the different expression of lncRNA from Expression profiling by array?

use “limma”or other else?

R • 894 views
ADD COMMENTlink modified 2.8 years ago by geek_y11k • written 2.8 years ago by a511512345110

Do you have the LncRNA expression levels from your expression profiling array ?

ADD REPLYlink written 2.8 years ago by geek_y11k

it is from GEO....

ADD REPLYlink written 2.8 years ago by a511512345110

what about ballgown? when I use ballgown, I can not add genename to the my output csv?how to solve it?

ADD REPLYlink written 2.8 years ago by Bruce0
1
gravatar for geek_y
2.8 years ago by
geek_y11k
Barcelona
geek_y11k wrote:

If you have the expression values of LncRNA of your interests across different conditions, you can apply any method that is been used for differential expression analysis. As you have already said, "Limma" would be a good choice

ADD COMMENTlink written 2.8 years ago by geek_y11k

thanks a lot。 i am a newbie

ADD REPLYlink written 2.8 years ago by a511512345110
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