Question: How to find the different expression of lncRNA
0
gravatar for a511512345
21 months ago by
a51151234580
China guangxi nanning
a51151234580 wrote:

How to find the different expression of lncRNA from Expression profiling by array?

use “limma”or other else?

R • 720 views
ADD COMMENTlink modified 21 months ago by geek_y9.6k • written 21 months ago by a51151234580

Do you have the LncRNA expression levels from your expression profiling array ?

ADD REPLYlink written 21 months ago by geek_y9.6k

it is from GEO....

ADD REPLYlink written 21 months ago by a51151234580

what about ballgown? when I use ballgown, I can not add genename to the my output csv?how to solve it?

ADD REPLYlink written 21 months ago by Bruce0
1
gravatar for geek_y
21 months ago by
geek_y9.6k
Barcelona/CRG/London/Imperial
geek_y9.6k wrote:

If you have the expression values of LncRNA of your interests across different conditions, you can apply any method that is been used for differential expression analysis. As you have already said, "Limma" would be a good choice

ADD COMMENTlink written 21 months ago by geek_y9.6k

thanks a lot。 i am a newbie

ADD REPLYlink written 21 months ago by a51151234580
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