Question: How to find the different expression of lncRNA
0
gravatar for a511512345
11 months ago by
a51151234560
China guangxi nanning
a51151234560 wrote:

How to find the different expression of lncRNA from Expression profiling by array?

use “limma”or other else?

R • 532 views
ADD COMMENTlink modified 11 months ago by geek_y8.6k • written 11 months ago by a51151234560

Do you have the LncRNA expression levels from your expression profiling array ?

ADD REPLYlink written 11 months ago by geek_y8.6k

it is from GEO....

ADD REPLYlink written 11 months ago by a51151234560

what about ballgown? when I use ballgown, I can not add genename to the my output csv?how to solve it?

ADD REPLYlink written 11 months ago by Bruce0
1
gravatar for geek_y
11 months ago by
geek_y8.6k
geek_y8.6k wrote:

If you have the expression values of LncRNA of your interests across different conditions, you can apply any method that is been used for differential expression analysis. As you have already said, "Limma" would be a good choice

ADD COMMENTlink written 11 months ago by geek_y8.6k

thanks a lot。 i am a newbie

ADD REPLYlink written 11 months ago by a51151234560
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