Question: How to get CDE ID corresponds to each column feature of clinical data from TCGA
0
gravatar for Fdota
2.7 years ago by
Fdota0
Fdota0 wrote:

Hello,

As a following up question to A: TCGA clinical feature meaning of "pct_tumor_invasion" for TCGA-UCEC project (Ute, how can I get CDE ID corresponds to each column feature of clinical data from TCGA. I am using "TCGAbiolinks" package by Bioconductor to get those datasets, which dataset should I get? Thanks!!

ADD COMMENTlink modified 7 weeks ago by Kevin Blighe60k • written 2.7 years ago by Fdota0
1
gravatar for Kevin Blighe
2.7 years ago by
Kevin Blighe60k
Kevin Blighe60k wrote:

Dear Fdota, I have just responded to your other thread, effectively answering this question: C: TCGA clinical feature meaning of "pct_tumor_invasion" for TCGA-UCEC project (Ute

Kevin

ADD COMMENTlink written 2.7 years ago by Kevin Blighe60k

Update 24th September 2018:

Yet another updated answer, with further information: A: TCGA patient variable data dictionary

ADD REPLYlink written 20 months ago by Kevin Blighe60k

Update 10th April 2020:

...and another: NIH CDE browser for TCGA clinical data CDE codes

ADD REPLYlink written 7 weeks ago by Kevin Blighe60k
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1935 users visited in the last hour