How to get CDE ID corresponds to each column feature of clinical data from TCGA
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4.0 years ago
Fdota • 0

Hello,

As a following up question to A: TCGA clinical feature meaning of "pct_tumor_invasion" for TCGA-UCEC project (Ute, how can I get CDE ID corresponds to each column feature of clinical data from TCGA. I am using "TCGAbiolinks" package by Bioconductor to get those datasets, which dataset should I get? Thanks!!

TCGA CDE clinical bioconductor TCGAbiolinks • 2.1k views
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4.0 years ago

Dear Fdota, I have just responded to your other thread, effectively answering this question: C: TCGA clinical feature meaning of "pct_tumor_invasion" for TCGA-UCEC project (Ute

Kevin

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Update 24th September 2018:

Yet another updated answer, with further information: A: TCGA patient variable data dictionary

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Update 10th April 2020:

...and another: NIH CDE browser for TCGA clinical data CDE codes

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