Question: SciClone Cluster Number
gravatar for mndavies286
17 days ago by
mndavies2860 wrote:

A question on the Sciclone output. In some samples the first cluster begins with "0", in other it begins with "1".

Was is the significance of variants assigned to the "0" cluster, where the probability of belonging to each cluster is defined as 'NA'? Is the implication that these are variants that do not fit into any defined cluster but are put into a category of exclusion (essentially each forming a cluster of their own)?

Thank you for your help.

sciclone • 104 views
ADD COMMENTlink modified 15 days ago by Chris Miller18k • written 17 days ago by mndavies2860
gravatar for Chris Miller
15 days ago by
Chris Miller18k
Washington University in St. Louis, MO
Chris Miller18k wrote:

Yes, the 0 cluster contains outlier points that were excluded from analysis.

ADD COMMENTlink written 15 days ago by Chris Miller18k
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