Question: SciClone Cluster Number
0
gravatar for mndavies286
10 weeks ago by
mndavies2860 wrote:

A question on the Sciclone output. In some samples the first cluster begins with "0", in other it begins with "1".

Was is the significance of variants assigned to the "0" cluster, where the probability of belonging to each cluster is defined as 'NA'? Is the implication that these are variants that do not fit into any defined cluster but are put into a category of exclusion (essentially each forming a cluster of their own)?

Thank you for your help.

sciclone • 179 views
ADD COMMENTlink modified 10 weeks ago by Chris Miller19k • written 10 weeks ago by mndavies2860
1
gravatar for Chris Miller
10 weeks ago by
Chris Miller19k
Washington University in St. Louis, MO
Chris Miller19k wrote:

Yes, the 0 cluster contains outlier points that were excluded from analysis.

ADD COMMENTlink written 10 weeks ago by Chris Miller19k
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