Question: SciClone Cluster Number
0
gravatar for mndavies286
9 months ago by
mndavies2860 wrote:

A question on the Sciclone output. In some samples the first cluster begins with "0", in other it begins with "1".

Was is the significance of variants assigned to the "0" cluster, where the probability of belonging to each cluster is defined as 'NA'? Is the implication that these are variants that do not fit into any defined cluster but are put into a category of exclusion (essentially each forming a cluster of their own)?

Thank you for your help.

sciclone • 371 views
ADD COMMENTlink modified 9 months ago by Chris Miller20k • written 9 months ago by mndavies2860
1
gravatar for Chris Miller
9 months ago by
Chris Miller20k
Washington University in St. Louis, MO
Chris Miller20k wrote:

Yes, the 0 cluster contains outlier points that were excluded from analysis.

ADD COMMENTlink written 9 months ago by Chris Miller20k
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