Question: RPKM documentation is needed!
gravatar for sima_r1391
2.8 years ago by
sima_r13910 wrote:

How can i find a description for RPKM file downloaded from GTEXprtal? I don't know what is what in RPKM file. I need to extract the muscle-skeletal information. I already have a list of muscle-skeletal sample IDs from GTEx_Data_V6_Annotations_SampleAttributesDS.txt.

Thanks in advance

rna-seq gtex rpkm • 844 views
ADD COMMENTlink written 2.8 years ago by sima_r13910

Can you give us the header of your file for instance? :)

The definition of RPKM can be found here and here to give you several ways to explain it. And to give you one of the important point of these links, __"RPKM is a unit of expression, not a method"__.

ADD REPLYlink modified 2.8 years ago • written 2.8 years ago by glihm620

I think you should read this (as a side note):

ADD REPLYlink written 2.8 years ago by Macspider3.1k
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