Closed:Manhattan plot in r

Question

[Ana]

Hi all I just want to draw a Manhattan plot for several environmental variable (Bayes factors for several env.variable; columns 3-5) in a loop in r. I want to draw a plot for each variable. this is the head of my data

> head(chrom1)
  snp_pos chrom      MAT_e     MVMT_e     MCMT_e  snp_id
1   52967     0  -5.892840  -5.445123  -6.327080 52967_0
2   53241     0 -11.409509 -11.438922 -11.109112 53241_0
3   68062     0  -6.409155  -5.544443  -6.774634 68062_0
4   68080     0 -11.501740 -12.907424  -8.474243 68080_0
5   68285     0 -12.400456 -12.633168 -12.630723 68285_0
6   68296     0 -11.319704 -10.951429 -12.062912 68296_0

I am trying something like this, bust does not work and I am stuck now

pdf (file ="manhattan_plots.pdf", width = 24)

for (i in 3:5){
manhattan(chrom1,bp ="snp_pos", chr = "chrom", p ="i", snp = "snp", logp = FALSE, ylim = c(-20,50),suggestiveline = FALSE, genomewideline = 10, xlab = "chromosome", ylab = "BFis (in dB)", col = c("blue4", "orange3"))
}

dev.off()

I get this error message Error in manhattan(chrom1, bp = "snp_pos", chr = "chrom", p = "i", snp = "snp", : Column i not found!

how can I fix this? Thanks