Convert Clustal format to Fasta format
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3.7 years ago

Hi everyone! I have 1400 files in clustal format and I need to convert them all to fasta format. Do someone know how I can do it? Or if it exist some tool that I can use? Can I do it on my terminal or I have to write a script? I will be very grateful for your help :)

fasta clustal converter many files • 4.2k views
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3.7 years ago
GenoMax 108k

Look into Emboss readseq or seqret utilities ( e.g. https://www.ebi.ac.uk/Tools/sfc/emboss_seqret/ ). You can install EMBOSS locally to run it on the command line.

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Thank you very much. I will try it now :)

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