I am running the following command
bin/kissplice -s 1 -k 41 --experimental -r /path/to/read1 -r /path/to/read2
using kissplice-2.4.0-p1 (note: I installed this on my institution's cluster, so I used make install instead of sudo make install)
I am getting an error about 3 minutes after running the above line:
Building de Bruijn graph... Graph will be written in results/graph_PF01_R1_PF01_R2_k41.[edges/nodes] estimated values: nbits Bloom 33, nb FP 14511889, max memory 1024 MB File /tmp/kissplice.R_37HJ/all_read_filenames starts with character "/", hence is interpreted as a list of file names Reading 2 read files Available disk space in /path/to/reads: 213243762 MB error: can't fwrite (disk full?) taille cell 32 Sequentially counting ~319864 MB of kmers with 113 partition(s) and 4 passes using 1 thread(s), ~1024 MB of memory and ~83522 MB of disk space
There are 210 Tb of space left on the partition of the cluster I am using, but it still says disk full, can't fwrite.
Any help is appeciated. Thanks!