Fungal genome annotation with or without RNA seq data
0
0
Entering edit mode
3.6 years ago
Morgan S. ▴ 40

Hi,

I have been looking to use Maker 2 for eukaryotic genome annotation. I am a little lost on if I need to provide rna seq/EST data in order for the annotation to work? I do not have this data, unfortunately.

Thanks, Morgan

genome rna-seq fungi annotation • 1.4k views
ADD COMMENT
0
Entering edit mode

RNAseq / EST data from the same species will improve the quality of the annotation. You can use EST / transcripts / protein from other - better if closely related - species.

ADD REPLY

Login before adding your answer.

Traffic: 2336 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6